Lead Computational Biologist: Protein Engineering

3 weeks ago


London, Greater London, United Kingdom Baseimmune Full time
Position Overview

Lead Computational Biologist: Protein Engineering

Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Machine Learning / Statistical Analysis / Protein Architecture

Team: Computational Biology

About Us

Baseimmune is an innovative biotechnology start-up focused on transforming vaccine development through cutting-edge computational antigen design. Our mission is to leverage data science, machine learning, and computational biology to create vaccines that are resilient to mutations and provide cross-protection.

Role Summary

We are in search of a seasoned Computational Protein Engineering expert to join our Antigen Design team. The successful candidate will possess a strong background in employing advanced machine learning techniques, including generative models, to create novel protein structures. They will be adept at developing computational workflows for the design, analysis, and validation of protein constructs. This position necessitates a comprehensive understanding of protein biochemistry to facilitate effective collaboration with laboratory scientists and immunologists in the design and validation of vaccine antigens.

Key Responsibilities

Scientific Objectives

  • Lead the creation of computational workflows utilizing AI methodologies to design proteins intended for vaccine applications.
  • Work closely with laboratory teams to validate and assess newly developed methodologies through computational, experimental, and biological models.
  • Utilize computational pipelines and structural knowledge to design proteins that present target epitopes in optimal configurations.
  • Collaborate across diverse teams, including immunologists, evolutionary biologists, molecular biologists, and machine learning engineers, to ensure that novel designs are optimized for eliciting effective immune responses.
  • Analyze and interpret experimental findings to enhance the design process.

Strategic Objectives

  • Remain informed about the latest advancements and research in the field.
  • Evaluate progress in protein engineering and guide development strategies.
  • Mentor junior scientists and team members, fostering a collaborative environment while establishing expertise in your technical domain.
  • Contribute to scientific literature and represent Baseimmune at relevant scientific gatherings.

Essential Qualifications and Skills

  • Ph.D. in Structural Biology, Biophysics, Computational Biology, Biochemistry, or a related discipline.
  • A minimum of 4 years of experience in computational protein engineering within academic or industry contexts.
  • 1-2 years of experience in a post-doctoral or industry role.
  • Demonstrated success in designing novel proteins using state-of-the-art computational techniques for biologics.
  • In-depth knowledge of statistical and machine learning methods applied to protein design, including RFdiffusion, MPNN, AlphaFold, and Rosetta.
  • Proficient in programming with Python and utilizing Linux command line.
  • Strong analytical skills, problem-solving capabilities, and strategic thinking.
  • Proven record of scientific innovation and publications in esteemed journals.
  • Ability to work autonomously and collaboratively in a dynamic environment.

What We Offer

  • Competitive salary package
  • Comprehensive private health insurance
  • Opportunities for professional growth and development
  • Generous holiday leave policy
  • Enhanced sick leave provisions
  • Pension scheme

Baseimmune is an equal opportunity employer and values diversity and inclusion in our workforce.



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