Lead Computational Biologist in Protein Engineering

3 weeks ago


London, United Kingdom Baseimmune Full time

Lead Computational Biologist in Protein Engineering

Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein Structures

Team: Computational Biology

About Us

Baseimmune is an innovative biotechnology startup focused on transforming vaccine development through cutting-edge computational antigen design. Our mission is to leverage advancements in data science, machine learning, and computational biology to create vaccines that are both cross-protective and resilient to mutations.

Position Overview

We are looking for a seasoned specialist in Computational Protein Design to enhance our Antigen Design team. The successful candidate will possess extensive experience in employing deep learning techniques, including generative AI, to craft novel protein structures. This role demands proficiency in developing computational workflows for the design, analysis, and validation of protein structures, alongside a robust understanding of protein biochemistry to facilitate effective collaboration with laboratory scientists and immunologists.

Key Responsibilities

Scientific Goals

  • Lead the creation of computational workflows utilizing AI methodologies to engineer proteins intended for vaccine applications.
  • Work closely with laboratory teams to validate and assess new methodologies through in silico, in vitro, and in vivo evaluations.
  • Employ computational techniques and structural expertise to design proteins that present target epitopes in specific conformations.
  • Collaborate across diverse teams, including immunologists, evolutionary biologists, molecular biologists, and ML engineers, to ensure that novel designs are optimized for eliciting cross-protective immune responses.
  • Analyze and interpret experimental findings to refine the design process.

Strategic Goals

  • Stay informed on the latest research and advancements in the field.
  • Evaluate developments in protein engineering and establish strategic directions for the team.
  • Mentor junior scientists and foster a collaborative team environment while becoming a recognized expert in your area of expertise.
  • Contribute to scientific publications and represent Baseimmune at academic conferences.

Essential Qualifications and Skills

  • Ph.D. in Structural Biology, Biophysics, Computational Biology, Biochemistry, or a related discipline.
  • A minimum of 4 years of experience in computational protein design within an academic or industry context.
  • 1-2 years of experience in a post-doctoral or industry role.
  • A proven history of successfully designing novel proteins using advanced computational methods for biologics.
  • In-depth knowledge of statistical and deep learning techniques applied to protein design, including RFdiffusion, MPNN, AlphaFold, and Rosetta.
  • Proficient in programming with Python and utilizing Linux command line.
  • Strong analytical skills, problem-solving capabilities, and strategic thinking.
  • A demonstrated record of scientific innovation and publications in respected journals.
  • Ability to work both independently and collaboratively in a dynamic environment.

What we Offer

  • Competitive starting salary.
  • Private medical health insurance.
  • Opportunities for career advancement and professional development.
  • 26 days of holiday leave plus bank holidays.
  • Enhanced sick pay.
  • Pension plan.

Baseimmune is an equal opportunity employer and values diversity and inclusion in the workplace.



  • London, Greater London, United Kingdom Baseimmune Full time

    Position OverviewLead Computational Biologist: Protein EngineeringKeywords: Computational Biochemist / Biophysicist / Protein Engineer / Machine Learning / Statistical Analysis / Protein ArchitectureTeam: Computational BiologyAbout UsBaseimmune is an innovative biotechnology start-up focused on transforming vaccine development through cutting-edge...


  • London, Greater London, United Kingdom Baseimmune Full time

    Job OverviewWe are seeking an experienced Computational Protein Design specialist to join our Antigen Design team at Baseimmune. The ideal candidate will have a proven track record in using deep learning methodologies, including generative AI, to design de novo protein structures.Key Responsibilities:Drive the development of computational pipelines that use...


  • London, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein Design Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein Structures Team: Computational Biology Start date: 2024, immediate Period: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role ...


  • London, United Kingdom baseimmune Full time

    Senior Computational Biologist: Protein DesignRead on to find out what you will need to succeed in this position, including skills, qualifications, and experience.Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time,...


  • London, United Kingdom baseimmune Full time

    Senior Computational Biologist: Protein DesignRead on to find out what you will need to succeed in this position, including skills, qualifications, and experience.Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time,...


  • London, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein Design Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein Structures Team: Computational Biology Start date: 2024, immediate Period: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role ...


  • London, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein DesignKeywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role with the...


  • London, United Kingdom baseimmune Full time

    Senior Computational Biologist: Protein DesignBefore applying for this role, please read the following information about this opportunity found below.Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location:...


  • London, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein DesignKeywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role with the...


  • London, United Kingdom baseimmune Full time

    Senior Computational Biologist: Protein DesignBefore applying for this role, please read the following information about this opportunity found below.Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location:...


  • London Area, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein DesignKeywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role with the...


  • London Area, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein Design Keywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein Structures Team: Computational Biology Start date: 2024, immediate Period: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role ...


  • London Area, United Kingdom Baseimmune Full time

    Senior Computational Biologist: Protein DesignKeywords: Computational Biochemist / Biophysicist / Protein Engineer / Deep Learning / Statistics / Protein StructuresTeam: Computational BiologyStart date: 2024, immediatePeriod: Full time, permanent Location: London Bioscience Innovation Centre in King’s Cross, London. This is a full-time role with the...


  • London, Greater London, United Kingdom Avanti Recruitment Full time

    About the RoleAvanti Recruitment is seeking a highly skilled and experienced Computational Biologist to join our team. As a postdoctoral researcher in computational biology, you will have the opportunity to work on cutting-edge projects in protein design and vaccine sequencing.Key Responsibilities:Develop and apply computational models for protein design and...


  • London, Greater London, United Kingdom Baseimmune Full time

    Job DescriptionCompany OverviewBaseimmune is a pioneering biotechnology start-up revolutionizing vaccines through cutting-edge computational antigen design. Founded by the team that pioneered computational vaccines at the University of Oxford, our mission is to harness the fields of data science, machine learning, and computational biology to redefine...


  • London, Greater London, United Kingdom Baseimmune Full time

    Job DescriptionCompany OverviewBaseimmune is a pioneering biotechnology start-up revolutionizing vaccines through cutting-edge computational antigen design. Founded by the team that pioneered computational vaccines at the University of Oxford, our mission is to harness the fields of data science, machine learning, and computational biology to redefine...


  • London, Greater London, United Kingdom Avanti Full time

    Job SummaryAvanti is seeking a highly skilled Computational Biologist to join our team. As a protein design specialist with expertise in RFDiffusion, you will play a key role in advancing our research in protein design and vaccine sequencing.Key ResponsibilitiesDesign and develop novel protein sequences using RFDiffusion and other computational...


  • London, United Kingdom Avanti Recruitment Full time

    Avanti is currently looking for a post doc Computational Biologist (protein design specialist with RFDiffusion experience) with demonstrable publication experience in the research field of protein design and vaccine sequencing. More info on the technical aspects, interview process and ascertaining the correct level of technical ability for the Senior...


  • London, United Kingdom Avanti Full time

    Avanti is currently looking for a post doc Computational Biologist (protein design specialist with RFDiffusion experience) with demonstrable publication experience in the research field of protein design and vaccine sequencing. Location, London (Camden area, hybrid) Salary, £45k to £55k DOE and postdoc experience More info on the technical aspects,...


  • London, Greater London, United Kingdom Baseimmune Full time

    Job DescriptionCompany OverviewBaseimmune is a pioneering biotechnology start-up revolutionizing vaccines through advanced computational antigen design. Our mission is to harness the fields of data science, machine learning, and computational biology to redefine cross-protective and mutation-proof vaccines.Job SummaryWe are seeking an experienced...