Senior Computational Software Engineer

4 weeks ago


Hinxton, United Kingdom Wellcome Sanger Institute Full time
Position Overview

Are you passionate about enhancing human health and unraveling the mysteries of life on Earth? We are seeking a dedicated Computational Scientist to innovate software solutions for phylogenomic studies utilizing nanopore amplicon data.

Role Responsibilities

As a key contributor, you will:
  • Drive the development of the Ampliseq initiative focused on phylogenomic analysis using nanopore amplicon data.
  • Lead the creation of a software pipeline for phylogenomic studies, employing novel algorithms or machine learning techniques.
  • Ensure that software tools align with current production requirements and future advancements.
  • Evaluate the quality of the Ampliseq pipeline and provide constructive feedback to support the in-house research team.
  • Conduct de novo assemblies from various data types to facilitate genome analysis.
  • Document methodologies and offer training to users with limited bioinformatics experience.
  • Publish research findings in peer-reviewed journals and present at national and international conferences.
  • Investigate new applications in Genome Informatics, including testing new data types and software tools.
Candidate Profile

The ideal candidate will possess:
  • A PhD in Computer Science, Mathematics, Physics, or a related computational field.
  • Proficiency in programming under Unix/Linux environments using C/C++ or Python.
  • Experience in large-scale scientific computation and simulation.
  • Expertise in numerical algorithm design.
Key Competencies

The successful applicant will demonstrate:
  • A proven track record of collaboration within a project-focused software team, valuing the contributions of colleagues.
  • The ability to work independently and collaboratively in a supportive environment.
  • Effective communication skills with interdisciplinary stakeholders.
  • A commitment to inclusivity and respect for all individuals.
  • Experience in delivering high-quality products within established timelines.
  • Strong analytical, problem-solving, and creative thinking abilities to navigate challenges.
About the Organization

Within the High Performance Algorithm group, we specialize in developing algorithms and software tools for genome assembly and sequence analysis across various applications. Our bioinformatics packages are highly regarded within the genomics community, and we are eager to welcome exceptional computational scientists to contribute to this dynamic field.

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