Bioimaging Data Resources Research Software Engineer

4 days ago


Saffron Walden, Essex, United Kingdom EMBL-EBI Careers Full time

Job Summary

The revolution in imaging technologies has led to the need to share, integrate and reuse image data in a comprehensive way. As a world-leader in archival and dissemination of biological image data, EMBL-EBI operates the BioImage Archive and EMPIAR (the Electron Microscopy Public Image Archive), providing the means to store and search life science datasets from all imaging technologies at all scales and across all modalities.

These data resources are growing rapidly, and provide critical services to tens of thousands of scientists worldwide. We are seeking a talented research software engineer to support the next phases of their development, extending services to support the growing biosciences AI community and accommodate new imaging modalities such as cryoET.

Your Role

The role will work across the technical stack to support scaling and automation of deposition and presentation systems for high volumes of biological image data. You will extend and build on the EMBL-EBI imaging resources to enable better automation, integrate with high performance computing and storage resources and develop/implement new functionality, such as extraction of structured metadata from freeform text through LLMs.

Key Responsibilities

  • Develop and integrate systems for interactive visualisation of biological images
  • Extend and build on existing EMBL-EBI imaging resources
  • Integrate with high performance computing and storage resources
  • Develop new functionality, such as extraction of structured metadata from freeform text through LLMs

What We Offer

As a research software engineer at EMBL-EBI, you will have the opportunity to work on cutting-edge projects, collaborate with a talented team of scientists and engineers, and contribute to the development of innovative solutions for the biosciences community.



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