Bioinformatician (m/f/d) / Data Scientist (m/f/d)

2 weeks ago

India, United Kingdom HAWK Hochschule für angewandte Wissenschaft und Kunst Full time €40,000 - €87,500

HAWK is a state university in Lower Saxony with more than 6,000 students. The university has strong regional roots and excellent national and international networks. One reason for this is certainly its roots, which go back to the 19th century at the Holzminden site, for example.

The HAWK University of Applied Sciences Hildesheim/Holzminden/Göttingen is seeking to fill the following 3-year fixed-term position at the Faculty of Engineering and Health at the Göttingen site as of 01.09.2024:

Bioinformatician (m/f/d)/Data Scientist (m/f/d) (E 13 TV-L, full-time)

As part of the DFG project FLIX-Nanopore, we are investigating an innovative method for in vivo mapping of transcription factor-DNA interactions using femtosecond laser crosslinking and advanced nanopore sequencing to study gene regulatory networks.
The aim of the project is to combine information from DNA-protein interactions (modification analysis) and long-read sequencing data to establish a new method for exploring genomic structural information.

As part of the project, you will perform the following tasks:
  • Establishment of a coherent analysis workflow of long-read sequencing results in collaboration with natural scientists (m/f/d) and benchmarking of pipelines for pre-processing and analysis of DNA datasets (GWAS, WES, WGS)
  • Preparation of analysis and validation of genome sequencing results
  • Development and implementation of new bioinformatics workflows
  • Performing functional and structural genomic analyses to answer molecular biology/biomedical questions
  • Responsibility for the bioinformatic analysis of raw nanopore sequencing data, classification of the data according to the current state of research and extension of the analysis methodology with regard to basecalling and identification of modifications
Your profile
  • Completed studies (Master, Diploma, PhD) in computational biology, bioinformatics, computer science, biology or a related discipline with relevant professional experience in genomics, NGS (next generation sequencing) and bioinformatics
  • Practical experience in analyzing NGS data (especially nanopore long-read sequencing) and developing bioinformatics methods in this field of work
  • Solid programming experience and extensive knowledge in the use of common scripting languages (R, Python, C++, etc.) and background in deep learning network training
  • Experience with Git, Linux, high-performance computing, pre-processing and analysis of high-throughput data
  • Knowledge of statistical methods in connection with biological systems
Desirable
  • Experience in working with biological databases
  • Expert knowledge of transcriptomics, proteomics or multi-omics data
  • Knowledge of setting up analysis pipelines (Snakemake, Nextflow)
  • Enthusiasm for genome analysis in the context of basic research and interest in its further development
  • Support in the analysis and interpretation of bulk and single-cell sequencing data and the formulation of further hypotheses/research questions

There is the possibility of a PhD.

The HAWK sees itself as a place where opportunities are made possible. For this reason, the person holding the position is also expected to have an equality-oriented and diversity-friendly approach within the faculty and with the students.

Prof. Dr. Rußmann (christoph.russmann@hawk.de) will be happy to answer any technical questions.

The position allows part-time employment within the framework of the legal provisions.

Please send your detailed application as a PDF document by 19.07.2024 to the HAWK Human Resources Department, e-mail: jobboerse@hawk.de.

Information in accordance with Article 13 GDPR on the collection of personal data can be found on our homepage at:

As a diversity-friendly university, we also want employees with different backgrounds. People from underrepresented groups are therefore particularly encouraged to apply. Our university promotes the compatibility of family and career through very flexible working time models, among other things. The Equal Opportunities Office and the Staff Council will be happy to answer any questions you may have in this regard.

Persons with severe disabilities will be given preferential consideration if they have the same aptitude, qualifications and professional performance in accordance with the relevant regulations. To protect your interests, please let us know in your application whether you have a severe disability/equal status.

  • Research assistant

    4 weeks ago

    India, United Kingdom HAWK Hochschule für angewandte Wissenschaft und Kunst Full time

    HAWK is a state university in Lower Saxony with more than 6,000 students. The university has strong regional roots and excellent national and international networks. One reason for this is certainly its roots, which go back to the 19th century at the Holzminden site, for example. The HAWK University of Applied Sciences Hildesheim/Holzminden/Göttingen is...

  • Research assistant

    4 weeks ago

    India, United Kingdom HAWK Hochschule für angewandte Wissenschaft und Kunst Full time

    HAWK is a state university in Lower Saxony with more than 6,000 students. The university has strong regional roots and excellent national and international networks. One reason for this is certainly its roots, which go back to the 19th century at the Holzminden site, for example. The HAWK University of Applied Sciences Hildesheim/Holzminden/Göttingen is...

  • Software Engineer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have established...

  • Software Engineer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have established...

  • Software Engineer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have established...

  • Civil servant at the fourth qualification level as a consultant for IT service management

    4 weeks ago

    India, United Kingdom Bayerisches Staatsministerium für Wirtschaft, Landesentwicklung und Energie Full time

    The Bavarian State Ministry of Economic Affairs, Regional Development and Energy is looking for a full-time position in Unit Z5 "IuK, eAkte, Organization" in the near future. as a consultant for IT service management (m/f/d) The Bavarian State Ministry of Economic Affairs, Regional Development and Energy works to keep Bavaria competitive as a business...

  • IT Technician

    2 weeks ago

    India, United Kingdom Telekonnekt GmbH Full time €40,000 - €96,000

    IT Technician (m/f/d) at Telekonnekt also possible part-time or as a freelancer. Become part of our team and help us drive forward the telematics infrastructure in the healthcare sector! As an IT technician (m/f/d) at Telekonnekt, you will be responsible for the installation, configuration and maintenance of IT systems in the healthcare sector. You...

  • Programmer (m/f/d)

    4 weeks ago

    India, United Kingdom Thüringer Papierwarenfabrik C. Schröter GmbH & Co. KG Full time €40,000 - €95,000

    Programmer (m/f/d) You do like to make a impress the job? Then join us programmer (m/f/d) in Mühlhausen/Thür. What you can expect: Coding applications and apps Documentation of the work processes Optimization of existing applications Development and expansion of interfaces Constant revision of own work (error analysis) ...

  • Programmer (m/f/d)

    4 weeks ago

    India, United Kingdom Thüringer Papierwarenfabrik C. Schröter GmbH & Co. KG Full time €40,000 - €95,000

    Programmer (m/f/d) You do like to make a impress the job? Then join us programmer (m/f/d) in Mühlhausen/Thür. What you can expect: Coding applications and apps Documentation of the work processes Optimization of existing applications Development and expansion of interfaces Constant revision of own work (error analysis) ...

  • Research assistant

    4 weeks ago

    India, United Kingdom HAWK Hochschule für angewandte Wissenschaft und Kunst Full time

    HAWK is a state university in Lower Saxony with more than 6,000 students. The university has strong regional roots and excellent national and international networks. One reason for this is certainly its roots, which go back to the 19th century at the Holzminden site, for example. The HAWK University of Applied Sciences Hildesheim/Holzminden/Göttingen is...

  • IT Specialist as Software Developer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    AMPEG Ltd. IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have...

  • IT Specialist as Software Developer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    AMPEG Ltd. IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have...

  • IT Specialist as Software Developer

    4 weeks ago

    India, United Kingdom AMPEG GmbH Full time €42,500 - €85,000

    AMPEG Ltd. IT Specialist as Software Developer / Programmer - IT Security (m/f/d) Bremen part-time / full-time Founded in 1994, AMPEG has developed into a software manufactory specializing in security level analysis for corporate networks. With AMPEG Security Lighthouse, our market-leading software for security level management, we have...

  • Computer Scientist

    3 days ago

    India, United Kingdom Hochschule RheinMain Full time €40,000 - €82,000

    Computer Scientist as employee (m/f/d) OnSite Support / Client and IT Management (in the Department of Social Services) RheinMain University of Applied Sciences, with its campuses in Wiesbaden and Rüsselsheim, sees itself as a cosmopolitan, diverse university. It is recognized for its scientifically sound and professionally qualifying teaching as well...

  • Head of Sales

    3 weeks ago

    India, United Kingdom NetCologne IT Services GmbH Full time

    Head of Sales (m/f/d) Permanent position, full-time - Cologne Your tasks As Head of Sales (m/f/d), you will assume overall responsibility for the sales of our IT services. You are the central interface between our sales team and our customers and make a significant contribution to the success of our company. The development and implementation...

  • Computer scientist

    4 weeks ago

    India, United Kingdom pro-beam GmbH & Co. KGaA Full time €40,000 - €82,000

    Computer scientist / IT specialist (m/f/d) as IT system engineer We are one of the world's leading companies in the field of electron beam technology and operate in a complex technological environment - from welding to additive manufacturing. With our products and services, we actively shape the future, enable safe flights into space, equip millions of...

  • Software Developer Microsoft(m/f/d)

    4 weeks ago

    India, United Kingdom Workwise GmbH Full time €45,000 - €75,000

    Software Developer Microsoft(m/f/d) Location: 22525 Hamburg About the company Global by tradition. Original on principle. We are an international distributor of original consumables - with the emphasis on "original". As a Hanseatic company, we believe in reliability, cosmopolitanism, commercial daring, fairness, partnership and tradition. And just as...

  • Senior Frontend Developer

    4 weeks ago

    India, United Kingdom Workwise GmbH Full time €38,000 - €75,000

    Senior Frontend Developer - HTML5 / CSS3 / JavaScript / Web Development (m/f/d) Location: 09120 Chemnitz About the company Our history is characterized by innovation. Since the company was founded in 2001, we have been one of the few software manufacturers in the world to rely on a self-programmed integration platform. This allows us to seamlessly...

  • IT specialist as data manager

    4 weeks ago

    India, United Kingdom aluplast GmbH Full time €30,000 - €100,000

    IT specialist as data manager (m/f/d) We are one of the leading suppliers of PVC-U window systems and are known for our innovations. Employees, customers and partners are at the heart of our business activities. In just a few decades, we have developed into a globally active family business with 1,850 employees. We offer you the opportunity to grow...

  • IT specialist as data manager

    4 weeks ago

    India, United Kingdom aluplast GmbH Full time €30,000 - €100,000

    IT specialist as data manager (m/f/d) We are one of the leading suppliers of PVC-U window systems and are known for our innovations. Employees, customers and partners are at the heart of our business activities. In just a few decades, we have developed into a globally active family business with 1,850 employees. We offer you the opportunity to grow...