Software Engineering Specialist

4 weeks ago


Hinxton, United Kingdom Embl-Ebi Full time

About the Role

You will be responsible for the design, development, and operations of high-throughput pipelines necessary to support scientists worldwide in ingesting, processing, persisting, and distributing high volumes of sequence data.

Key Responsibilities

  • Collaborate with ENA's development and operational teams, EBI's IT and Technical services teams, and the International Nucleotide Sequence Database Collaboration (INSDC)
  • Work with large-scale databases (Oracle, MongoDB) and distributed data processing software (Hadoop, Spark)
  • Apply modern software development practices, including continuous integration and deployment, testing principles, and system monitoring
  • Contribute to a team of skilled professionals with diverse backgrounds

Requirements

  • At least 6 years of professional software development experience with Java and Spring framework
  • Experience with workflow management systems and distributed data processing software
  • Excellent knowledge of the UNIX command line
  • Ability to work in a multidisciplinary scientific environment

Desirable Skills

  • Experience working with sequence data and formats (FASTQ, BAM, CRAM, SRA)

Working for Embl-Ebi

As a member of Embl-Ebi, you will be part of a dynamic team contributing to the advancement of life sciences and biotechnology research


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