Genomics Operations Manager
2 days ago
Company Overview:
Basecamp Research is a pioneering organization in the field of genomics and AI-based biological design. Our mission is to create a comprehensive dataset for artificial intelligence, leveraging our vast biological database collected from diverse locations worldwide.
As a leader in biodiversity mapping, we collaborate with prominent technology, life sciences, and biopharma companies, as well as global organizations like Nvidia, Johnson Matthey, and renowned academic labs such as the David Liu Lab at the Broad Institute.
Job Description:This role involves taking ownership of sequencing and metagenomic data analysis production operations, ensuring seamless collaboration across teams at all data collection and analysis points. You will work closely with biodiversity partners, field scientists, sequencing operations, ML scientists, data engineers, and commercial stakeholders.
Responsibilities:- Develop and run software to support genome collection and sequencing operations, post-curation, and labelling of data.
- Manage and audit the data workflow of our samples from collection to data warehousing, including quality control of appropriate files and datasets.
- Collaborate with the Data Engineering team in building and managing the pipeline on our in-house designed infrastructure platform.
- Investigate, benchmark, and integrate novel analyses into the pipeline.
- Write and document high-quality code and methodology of processes.
- A graduate (MSc/PhD) degree in the life sciences, computer science, or similar.
- At least three years of post-bachelors experience in the life science and genomics, preferably in industry or a high-throughput research institute.
- Experience writing complex pipelines using workflow languages and tools for genomic and protein analysis.
- Proficiency in Unix-based operating systems, libraries, and tools.
- Knowledge and experience of tools used in bioinformatics in genomics, metagenomics, and/or protein biology.
- Proficiency with a programmatic scripting language (Python, Bash, etc).
Estimated Salary: $120,000 - $150,000 per annum.
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